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Speleology in Kazakhstan

Shakalov on 04 Jul, 2018
Hello everyone!   I pleased to invite you to the official site of Central Asian Karstic-Speleological commission ("Kaspeko")   There, we regularly publish reports about our expeditions, articles and reports on speleotopics, lecture course for instructors, photos etc. ...

New publications on hypogene speleogenesis

Klimchouk on 26 Mar, 2012
Dear Colleagues, This is to draw your attention to several recent publications added to KarstBase, relevant to hypogenic karst/speleogenesis: Corrosion of limestone tablets in sulfidic ground-water: measurements and speleogenetic implications Galdenzi,

The deepest terrestrial animal

Klimchouk on 23 Feb, 2012
A recent publication of Spanish researchers describes the biology of Krubera Cave, including the deepest terrestrial animal ever found: Jordana, Rafael; Baquero, Enrique; Reboleira, Sofía and Sendra, Alberto. ...

Caves - landscapes without light

akop on 05 Feb, 2012
Exhibition dedicated to caves is taking place in the Vienna Natural History Museum   The exhibition at the Natural History Museum presents the surprising variety of caves and cave formations such as stalactites and various crystals. ...

Did you know?

That weir coefficient is a coefficient used in transforming water depths into discharge volumes in weir measurements [16].?

Checkout all 2699 terms in the KarstBase Glossary of Karst and Cave Terms

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What is Karstbase?



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KarstBase a bibliography database in karst and cave science.

Featured articles from Cave & Karst Science Journals
Chemistry and Karst, White, William B.
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Featured articles from other Geoscience Journals
Karst environment, Culver D.C.
Mushroom Speleothems: Stromatolites That Formed in the Absence of Phototrophs, Bontognali, Tomaso R.R.; D’Angeli Ilenia M.; Tisato, Nicola; Vasconcelos, Crisogono; Bernasconi, Stefano M.; Gonzales, Esteban R. G.; De Waele, Jo
Calculating flux to predict future cave radon concentrations, Rowberry, Matt; Marti, Xavi; Frontera, Carlos; Van De Wiel, Marco; Briestensky, Milos
Microbial mediation of complex subterranean mineral structures, Tirato, Nicola; Torriano, Stefano F.F;, Monteux, Sylvain; Sauro, Francesco; De Waele, Jo; Lavagna, Maria Luisa; D’Angeli, Ilenia Maria; Chailloux, Daniel; Renda, Michel; Eglinton, Timothy I.; Bontognali, Tomaso Renzo Rezio
Evidence of a plate-wide tectonic pressure pulse provided by extensometric monitoring in the Balkan Mountains (Bulgaria), Briestensky, Milos; Rowberry, Matt; Stemberk, Josef; Stefanov, Petar; Vozar, Jozef; Sebela, Stanka; Petro, Lubomir; Bella, Pavel; Gaal, Ludovit; Ormukov, Cholponbek;
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Your search for anaerobic (Keyword) returned 10 results for the whole karstbase:
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Katz B. G. , Lee T. M. , Plummer L. N. , Busenberg E. ,
Leakage from sinkhole lakes significantly influences recharge to the Upper Floridan aquifer in poorly confined sediments in northern Florida. Environmental isotopes (oxygen 18, deuterium, and tritium), chlorofluorocarbons (CFCs: CFC-11, CCl3F; CFC-12, CCl2F2; and CFC-113, C2Cl3F3), and solute tracers were used to investigate groundwater flow patterns near Lake Barco, a seepage lake in a mantled karst setting in northern Florida. Stable isotope data indicated that the groundwater downgradient from the lake contained 11-67% lake water leakage, with a limit of detection of lake water in groundwater of 4.3%. The mixing fractions of lake water leakage, which passed through organic-rich sediments in the lake bottom, were directly proportional to the observed methane concentrations and increased with depth in the groundwater flow system. In aerobic groundwater upgradient from Lake Barco, CFC-modeled recharge dates ranged from 1987 near the water table to the mid 1970s for water collected at a depth of 30 m below the water table. CFC-modeled recharge dates (based on CFC-12) for anaerobic groundwater downgradient from the lake ranged from the late 1950s to the mid 1970s and were consistent with tritium data. CFC-modeled recharge dates based on CFC-11 indicated preferential microbial degradation in anoxic waters. Vertical hydraulic conductivities, calculated using CFC-12 modeled recharge dates and Darcy's law, were 0.17, 0.033, and 0.019 mid for the surficial aquifer, intermediate confining unit, and lake sediments, respectively. These conductivities agreed closely with those used in the calibration of a three-dimensional groundwater flow model for transient and steady state flow conditions

Aufeis of the Firth River basin, Northern Yukon Canada: Insights into permafrost hydrogeology and Karst, 1997,
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Clark Id, Lauriol B,
The 31-km(2) aufeis ice sheet of the upper Firth River holds a wealth of information on groundwater hydrology in periglacial environments. Baseflow recession calculations, corrected for aufeis storage (12% of basin discharge), indicate specific groundwater recharge rates of up to 100 mm yr(-1) (up to 50% of runoff), suggesting a significant proportion of drainage from karst. The upper Firth River aufeis is a composite aufeis, with discrete baseflow contributions from different watersheds. Since the late Pleistocene, annual growth of the aufeis has exerted a strong control on lateral erosion and the local river channel geomorphology. Two groundwater recharge processes are distinguished on the basis of carbonate geochemistry and 8(13)C: (1) Methanogenic groundwaters, with C-13(DIC) up to -3.3 parts per thousand, are recharged through saturated soils underlain by permafrost; conditions which support anaerobic consumption of dissolved organic carbon (DOC) and produce up to 700 mu g-CH4 L-1 (calculated), and (2) Karst groundwaters, with C-13-depleted DIC, recharged through unsaturated soils and circulate through fissured talik in the carbonate bedrock. Most drainage from the region shows varying contributions of these two groundwaters, although a greater contribution from the methanogenic groundwaters occurs in north-facing watersheds. The 8(13)C values far cryogenic calcite precipitates in the ice indicate that the karst groundwaters are the major contribution to aufeis growth. The combined use of 8(13)C(DIC) and geochemistry may be a useful tool to quantify methanogenesis in northern watersheds

Oxidation of organic matter in a karstic hydrologic unit supplied through stream sinks (Loiret, France), 1998,
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Alberic P, Lepiller M,
The aim of this paper is to appraise the ability of the oxidation of riverine organic matter in the control of limestone dissolution, in a karst network. Biogeochemical processes during infiltration of river water into an alluvial aquifer have already been described for an average flow velocity of 4-5 m d(-1) (Jacobs, L. A., von Gunten, H. R., Keil, R, and Kuslys, M. (1988) Geochemical changes along a river-groundwater infiltration flow path: Glattfelden, Switzerland. Geochim. Cosmochim. Acta 52, 2693-2706; Von Gunten, H. R., Karametaxas, G., Krahenbuhl, U., Kuslys, M., Giovanoli R., Hoehn E. and Keil R. (1991) Seasonal biogeochemical cycles in riverborne groundwater. Geochim. Cosmochim. Acta 55, 3597-3609; Bourg, A. C. M. and Bertin, C. (1993) Quantitative appraisal of biogeochemical chemical processes during the infiltration of river water into an alluvial aquifer. Environ. Sci. Technol. 27, 661-666). Karstic drainage networks, such as in the River Loire-Val d'Orleans hydrologic system (Fig. 1), make possible flow velocities up to 200 m h(-1 a) and provide convenient access to different water samples several tens of km apart, at both extremities of the hydrologic unit (Chery, J.-L. (1983) Etude hydrochimique d'un aquifere karstique alimente par perte de cours d'eau (la Loire): Le systeme des calcaires de Beauce sous le val d'Orleans. These, Universite d'Orleans; Livrozet, E. (1984) Influence des apports de la Loire sur la qualite bacteriologique et chimique de l'aquifere karstique du val d'Orleans. These, Universite d'Orleans). Recharge of the karstic aquifer occurs principally from influent waters from stream sinks, either through coarse alluvial deposits or directly from outcrops of the regional limestone bedrock (Calcaires de Beauce). Recharge by seepage waters From the local catchment basin is small (Zunino, C., Bonnet, M. and Lelong, F. (1980) Le Val d'Orleans: un exemple d'aquifere a alimentation laterale. C. R. somm. Soc. Geol. Fr. 5, 195-199; Gonzalez R. (1992) Etude de l'organisation et evaluation des echanges entre la Loire moyenne et l'aquifere des calcaires de Beauce. These, Universite d'Orleans) and negligible in summer. This karstic hydrologic: system is the largest in France in terms of flow (tens to hundreds of m(3)/s) and provides the main water resource of the city of Orleans. Chemical compositions of influent waters (River Loire) and effluent waters (spring of the river Loiret) were compared, in particular during floods in summer 1992 and 1993 (Figs 2-4). Variation of chloride in the River Loire during the stream rise can be used as an environmental tracer of the underground flow (Fig. 2). Short transit times of about 3 days are detectable (Fig, 2) which are consistent with earlier estimations obtained with chemical tracers (Ref. in Chery, J.-L. (1983) These, Universite d'Orleans). Depending on the hydrological regime of the river, organic carbon discharge ranges between 3-7 and 2-13 mg/l for dissolved and particulate matter respectively (Fig. 3). Eutrophic characteristics and high algal biomasses are found in the River Loire during low water (Lair, N. and Sargos, D. (1993) A 10 year study at four sites of the middle course of the River Loire. I - Patterns of change in hydrological, physical and chemical variables in relation to algal biomass. Hudroecol. Appl. 5, 1-27) together with more organic carbon rich suspended particulate matter than during floods (30-40 C-org % dry weight versus 5-10%). Amounts of total organic carbon and dissolved oxygen (Fig. 3) dramatically decrease during the underground transport, whereas conversely, dissolved calcium, alkalinity and inorganic carbon increase (Fig. 4). Anoxia of outflows map start in April. Dissolution of calcium carbonates along the influent path outweighs closed system calcite equilibrium of inflow river waters (Table 3). The impact of organic matter oxidation on calcite dissolution may be traced by variations of alkalinity and total carbonates in water. Following, Jacobs, L. A., von Gunten, H. R., Keil, R. and Kuslys, M. (1988) Geochemical changes along a river-groundwater infiltration flow path: Glattfelden, Switzerland. Geochim. Cosmochim. Acta 52, 2693-2706), results are shown graphically (Fig. 5). Extent of reactions is controlled by the consumption of dissolved O-2 and nitrate for organic matter oxidation and by the release of Ca2 for calcite dissolution (Table 2). The karstic network is considered to behave like a biological reactor not exchanging with the atmosphere, with steady inhabitant microbial communities (Mariotti A., Landreau A, and Simon B. (1988) N-15 isotope biogeochemisrry and natural denitrification process in groundwater: Application to the chalk aquifer of northern France. Geochim. Cosmochim. Acta 52, 1869-1878; Gounot, A.-M. (1991) Ecologie microbienne des eaux ei des sediments souterrains. Hydrogeologie, 239-248). Thus, energy requirements only are considered, not carbon assimilation. Moreover, there is no necessity to invoke any delay for nitrification enhancement, as observed elsewhere, after waste water discharge into the river (Chesterikoff, A., Garban, B., Billen, G. and Poulin, M. (1992) Inorganic nitrogen dynamics in the River Seine downstream from Paris (France). Biogeochem. 17, 147-164). Main microbial processes are assumed to be aerobic respiration, nitrification and denitrification. Reactions with iron and manganese, real but not quantitatively important, were neglected. Sulphate reduction and methane formation, certainly not active, were not considered. Denitrification, which is suggested by low nitrate and ammonium concentrations and anoxia in the outflow, is known to be rapid enough to be achieved in a short time (Dupain, S. (1992) Denitrification biologique heterotrophe appliquee au traitement des eaux d'alimentation: Conditions de fonclionnement et mise au point d'un procede. These, Universite Claude Bernard, Lyon). Reaction are somewhat arbitrary but conform to general acceptance (Morel, M. M. and Hering, J. G. (1993) Principles and Applications of Aquatic Chemistry. Wiley, New York). Anaerobic ammonium oxidation (Mulder A., van de Graaf, A. A., Robertson, L: A. and Kuenen, J. G. (1995) Anaerobic ammonium oxidation discovered in a denitrifying fluidized bed reactor. FEMS Microbiol. Ecol. 16, 177-184). although possible, was not considered. In fact, C/N ratio of the reactive organic matter has only mild repercussions on the results; i.e. in the same range as the analytical errors for alkalinity and total carbonates. The objective was simply to roughly confront characteristics of outflowing waters and the calculation. Respective roles of aerobes and denitrifiers, for instance, are not certain. Several periods during low water or floods were selected with various ranges for calcium dissolution or nitrate and oxygen concentrations. The result is that in most cases simulation and data are in reasonable accordance (Fig. 5). Amounts of organic matter in River Loire are generally sufficient to sustain the process (Table 3. Particulate organic matter is probably the most reactive. The balance of oxidation of organic matter indicates that about 65 mu g C-org/l.h are oxidized during the transport without much variation with the river regime or organic discharge. It is concluded that limestone dissolution is directly dependent on organic matter oxidation, but variation occurs (7-29 mg CuCO3/l) with the level of bases that can be neutralized in the River Loire water. (C) 1998 Elsevier Science Ltd. All rights reserved

Growth and demise of an Archean carbonate platform, Steep Rock Lake, Ontario, Canada, 1999,
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Kusky T. P. , Hudleston P. J. ,
The Steep Rock Group of northwest Ontario's Wabigoon subprovince is one of the world's thickest Archean carbonate platform successions. It was deposited unconformably over a 3001-2928 Ma gneissic terrane, and contains a remarkable group of biogenic and oolitic limestones, dolostones, micrites, and karat breccias capped by a thick paleosol developed between and over karst towers. The presence of aragonite fans, herringbone calcite, and rare gypsum molds suggests that the carbonate platform experienced at least local anaerobic and hypersaline depositional conditions. This sequence shows that a combination of chemical and biological processes was able to build a carbonate platform 500 m thick by 3 billion years ago. The carbonate platform is structurally overlain by a mixture of complexly deformed rocks of the Dismal Ashrock forming a melange with blocks of ultramafic volcaniclastic rocks, mafic volcanics, carbonate, tonalite, lenses of Fe-ore rock, and metasedimentary rocks, in a shaly, serpentinitic, and fragmental ultramafic volcaniclastic matrix. The melange shows evidence of polyphase deformation, with early high-strain fabrics formed at amphibolite facies, and later superimposed brittle fabrics related to the final emplacement of the melange over the carbonate platform. An amphibolite- through greenschist-grade shear zone marks the upper contact of the melange with overlying mafic volcanic and tuffaceous rocks of the ca. 2932 Ma Witch Bay allochthon, interpreted as a primitive island are sequence. We suggest an evolutionary model for the area that begins with rifting of an are sequence (Marmion Complex of the Wabigoon are) that initiated subsidence and sedimentation on the Steep Rock platform and its correlatives that extend for a restored strike length exceeding 1000 km. Shallow water carbonate sedimentation continued until the platform was uplifted on the flanks of a flexural bulge related to the approach of the Witch Bay allochthon, representing collision of the rifted are margin of the Wabigoon subprovince with the Witch Bay are. Melange of the Dismal Ashrock was formed as off-axis volcanic rocks were accreted to the base of the Witch Bay allochthon prior to its collision with the Steep Rock platform

The Geomicrobiology of Ore Deposits, 2005,
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Southam G. , Saunders James A. ,
Bacterial metabolism, involving redox reactions with carbon, sulfur, and metals, appears to have been important since the dawn of life on Earth. In the Archean, anaerobic bacteria thrived before the Proterozoic oxidation of the atmosphere and the oceans, and these organisms continue to prosper in niches removed from molecular oxygen. Both aerobes and anaerobes have profound effects on the geochemistry of dissolved metals and metal-bearing minerals. Aerobes can oxidize dissolved metals and reduced sulfur, as well as sulfur and metals in sulfide minerals can contribute to the supergene enrichment of sulfide ores, and can catalyze the formation of acid mine drainage. Heterotrophic anaerobes, which require organic carbon for their metabolism, catalyze a number of thermodynamically favorable reactions such as Fe-Mn oxyhydroxide reductive dissolution (and the release of sorbed metals to solution) and sulfate reduction. Bacterial sulfate reduction to H2S can be very rapid if reactive organic carbon is present and can lead to precipitation of metal sulfides and perhaps increase the solubility of elements such as silver, gold, and arsenic that form stable Me-H2S aqueous complexes. Similarly, the bacterial degradation of complex organic compounds such as cellulose and hemicellulose to simpler molecules, such as acetate, oxalate, and citrate, can enhance metal solubility by forming Me organic complexes and cause dissolution of silicate minerals. Bacterially induced mineralization is being used for the bioremediation of metal-contaminated environments. Through similar processes, bacteria may have been important contributors in some sedimentary ore-forming environments and could be important along the low-temperature edges of high-temperature systems such as those that form volcanogenic massive sulfides

The transition of a freshwater karst aquifer to an anoxic marine system, 2005,
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Garman Km, Garey Jr,
Jewfish Sink is located in the shallow seagrass flats of the Gulf of Mexico in west central Florida. Jewfish Sink was a submarine spring until the drought of 1961-1962 when it ceased flowing. Today, the sink is an anaerobic marine basin and provides the opportunity to study the implications of saltwater intrusion in coastal karstic areas. The biogeochemistry of Jewfish Sink was studied from summer 2001 through spring 2004. A distinct feature of the sink is the uniform cold temperature (16-17 degrees C) of the deeper anoxic water that does not match groundwater found nearshore or onshore (22-24 degrees C). There are four zones within the sink: oxic zone, transition zone, upper anoxic zone, and anoxic bottom water. The anoxic bottom water does not mix with water from above but may be linked to deep Gulf shelf water through ancient aquifer conduits. The other three zones vary seasonally in oxygen, salinity, and temperature because of limited mixing in the winter due to cooling and sinking of surface water. The walls of the anoxic zones have characteristic microbial mats that are found in other sulfidic karstic features in the area. Bacterial activity appears to be carbon limited in the anoxic zones where sulfate reduction appears to be the major metabolic process. The reduction of sulfate to sulfide appears to be driven by irregular influxes of organic matter including macroalgae, horseshoe crabs, and stingrays that become entrapped within the sink. Bacterial activity in the oxic zones appears to be phosphate limited. Although the system is partially isolated from the overlying marine ecosystem, organic input from above drives the bacterial anaerobic ecosystem, resulting in a sulfide pump. In this model, sulfide percolates up through the karst and removes oxygen from the overlying sediment, which has likely caused changes in the shallow benthic ecosystem. Jewfish Sink appears to be part of an extensive anoxic subterranean estuary that extends under parts of at least three coastal counties in Florida and can serve as a model for the effects of rising sea levels or aquifer mining

Methane discharge into the Black Sea and the global ocean via fluid flow through submarine mud volcanoes, 2006,
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Wallmann Klaus, Drews Manuela, Aloisi Giovanni, Bohrmann Gerhard,
During the MARGASCH cruise M52/1 in 2001 with RV Meteor we sampled surface sediments from three stations in the crater of the Dvurechenskii mud volcano (DMV, located in the Sorokin Trough of the Black Sea) and one reference station situated 15[no-break space]km to the northeast of the DMV. We analysed the pore water for sulphide, methane, alkalinity, sulphate, and chloride concentrations and determined the concentrations of particulate organic carbon, carbonate and sulphur in surface sediments. Rates of anaerobic oxidation of methane (AOM) were determined using a radiotracer (14CH4) incubation method. Numerical transport-reaction models were applied to derive the velocity of upward fluid flow through the quiescently dewatering DMV, to calculate rates of AOM in surface sediments, and to determine methane fluxes into the overlying water column. According to the model, AOM consumes 79% of the average methane flux from depth (8.9 [middle dot] 10 6[no-break space]mol a- 1), such that the resulting dissolved methane emission from the volcano into the overlying bottom water can be determined as 1.9 [middle dot] 10 6[no-break space]mol a- 1. If it is assumed that all submarine mud volcanoes (SMVs) in the Black Sea are at an activity level like the DMV, the resulting seepage represents less than 0.1% of the total methane flux into this anoxic marginal sea. The new data from the DMV and previously published studies indicate that an average SMV emits about 2.0 [middle dot] 10 6[no-break space]mol a- 1 into the ocean via quiescent dewatering. The global flux of dissolved methane from SMVs into the ocean is estimated to fall into the order of 10 10[no-break space]mol a- 1. Additional methane fluxes arise during periods of active mud expulsion and gas bubbling occurring episodically at the DMV and other SMVs

Oxidation-reduction chemistry of Lechuguilla Cave seepage, 2007,
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Levy D. B.
Groundwater generally becomes increasingly reduced (decreasing Eh) with depth from the soil surface, and therefore seepage is a potential source of dissolved Mn, Fe, and NH4 to caves. In Lechuguilla Cave, both abiotic and biotic processes have contributed to the origin of a vast array of secondary speleogenetic features which are enriched in Fe and Mn oxides. Existing chemical and physical properties of Lechuguilla Cave pool water indicates oxidizing conditions, with dissolved Fe and Mn below detection, and N existing primarily as NO3. However, the redox chemistry of the cave seepage has not been well-studied. The objective of this study was to characterize the redox status of Lechuguilla Cave seepage and to test the hypothesis that seepage entering the cave from the overlying vadose zone is a potential source of dissolved Fe, Mn, and inorganic N (as both NH4 and NO3). If present in seepage, Fe, Mn, and NH4 will oxidize in the cave environment, resulting in non-detectable concentrations in cave pools. Seepage was collected from eight locations in the cave and analyzed for field parameters (pH, EC, dissolved O2(g), Eh, temperature) and concentrations of dissolved Fe (Fe2+ + total Fe), Mn, NO3 + NO2-N, and NH4-N. Results indicate that low organic C concentrations prevent the occurrence of complete anaerobic conditions in seepage, but the concentrations of Mn and NH4 indicate that slightly reducing conditions can exist. Iron concentrations were below detection (,0.06 mg L21) in all samples, and N existed primarily as NO3. Field-measured Eh values obtained using a Pt electrode (Ehm) did not correlate with computed Eh values for various redox couples (Ehc), and the poor agreement between Ehc values for the different couples indicates the absence of redox equilibria in the samples. Rather than characterization of redox status according to Eh, seepage is classified as ranging from oxic to suboxic. This redox classification indicates that Lechuguilla Cave seepage can generally be expected to contain low concentrations of organic C and dissolved Mn, dissolved O2(g) ranging from 1 mM to .30 mM, but with Fe below typical analytical detection limits.

Karst Geomorphology: Sulfur Karst Processes, 2013,
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Hose, L. D.

Recognition and understanding of the important role of sulfur redox processes in developing karst has grown over the last25 years with the discovery of remarkable sulfur-rich caves worldwide and advances in geomicrobiology. Recent work hasshown that microbes interact with hydrocarbons, calcium sulfate bedrock, magmatic fluids, and sulfide ore minerals toreduce gypsum/anhydrite to calcite, produce hydrogen sulfide and sulfuric acid, convert limestone to gypsum, in crease porosity in carbonate bedrocks, precipitate massive sulfur, and deposit Mississippi Valley-Type (MVT) ores. These processesare most active in the shallow phreatic and vadose-phreatic subsurface, where transitions between aerobic and anaerobicconditions exist.

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Kempe, S.

Germany exhibits a very diverse geological history. Thus, a large number of stratigraphically, petrographically and tectonically different carbonate and sulfate rocks exist that have been subject to karstification. Here, I discuss first the possible “agents” (sensu Klimchouk) of hypogene karstification. Three principally different processes are identified: water rising because of buoyancy (either thermally or concentration induced), in-situ oxidation of siderite, or rising gases (CO2, CH4 or H2S). Next, a rough overview of German caves and karst is presented. If applying the most pertinent epigene versus hypogene morphological characteristics, it becomes evident that hypogene caves occur in many different areas, often side-by-side with clearly epigene caves. For many areas, the agents of hypogene speleogenesis must remain unclear. This applies for most caves in the Paleozoic limestones of the Rhenish Schist Massif. Only the Iberg/Harz caves seem to be a clear case, with the world-wide highest concentrations of siderite weathering-induced caves occur. The large cavities discovered recently in the Blauhöhlen System and some of the deep pit caves in the Swabian Alb may have their explanation in volcanic CO2, having emanated from some of the 355 pipes of the Swabian volcanic field. Most striking is the high concentration of hypogene caves in the Franconian Alb. Many of them occur in a small area while other areas are devoid of larger caves. Here the tectonic situation suggests that fractures could have taped reservoirs of either sulfide or methane from below. The finding of goethitic crusts in the Bismarckgrotte may indicate that rising anaerobic gases could have been involved

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